Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caspase domain protein | BACPLE_02981 | Not Available | Negative | 3282289 - 3283176 | 33388.8 |
| hypothetical protein | BACPLE_02982 | Not Available | Positive | 3283210 - 3283350 | 5373.74 |
| hypothetical protein | BACPLE_02983 | Not Available | Positive | 3283397 - 3283981 | 22694.0 |
| hypothetical protein | BACPLE_02984 | Not Available | Positive | 3284012 - 3284431 | 16030.0 |
| hypothetical protein | BACPLE_02985 | Not Available | Negative | 3284517 - 3285380 | 30074.6 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_02986 | Not Available | Negative | 3285631 - 3286392 | 27083.9 |
| hypothetical protein | BACPLE_02987 | Not Available | Negative | 3286423 - 3286656 | 8638.55 |
| peptidyl-prolyl cis-trans isomerase slyd, fkbp-type | BACPLE_02988 | Not Available | Positive | 3286795 - 3287385 | 21571.2 |
| hypothetical protein | BACPLE_02989 | Not Available | Positive | 3287469 - 3288323 | 31569.1 |
| hypothetical protein | BACPLE_02990 | Not Available | Positive | 3288518 - 3289222 | 26269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

