Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l27 | BACPLE_02971 | Not Available | Positive | 3272020 - 3272283 | 9148.99 |
| hypothetical protein | BACPLE_02972 | Not Available | Negative | 3272250 - 3272405 | 5916.34 |
| cna protein b-type domain protein | BACPLE_02973 | Not Available | Positive | 3272464 - 3274383 | 69285.8 |
| putative beta-lactamase | BACPLE_02974 | Not Available | Positive | 3274493 - 3275386 | 33562.1 |
| hypothetical protein | BACPLE_02975 | Not Available | Negative | 3275365 - 3276663 | 48836.3 |
| transcriptional regulator, arac family | BACPLE_02976 | Not Available | Positive | 3276789 - 3277685 | 34559.7 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BACPLE_02977 | Not Available | Negative | 3277682 - 3278458 | 28247.4 |
| hypothetical protein | BACPLE_02978 | Not Available | Negative | 3278550 - 3280949 | 92519.8 |
| hypothetical protein | BACPLE_02979 | Not Available | Negative | 3280940 - 3281689 | 29477.1 |
| rna polymerase sigma factor, sigma-70 family | BACPLE_02980 | Not Available | Negative | 3281693 - 3282277 | 22902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

