Phocaeicola plebeius DSM 17135

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius DSM 17135 is a Gram-negative, non-sporulating rod-shaped bacterium classified within the intestinal microflora of animals. This organism is a chemoheterotroph, deriving its energy from organic compounds, and operates as an anaerobe, thriving in oxygen-depleted environments typical of the gastrointestinal tract. As a member of the animal intestinal microbiota, Phocaeicola plebeius may play a significant role in the digestive processes and overall health of its host. Its absence or imbalance could potentially disrupt normal gut function, highlighting its importance in maintaining the homeostasis of the intestinal ecosystem. Furthermore, the specific adaptation to an anaerobic lifestyle suggests that Phocaeicola plebeius may be involved in the fermentation processes, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. Overall, the traits of Phocaeicola plebeius underline its specialized ecological niche and suggest potential implications for gut health and microbial interactions within the animal intestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainDSM 17135

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius DSM 17135
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius DSM 17135 B_plebeius-2.0.1_Cont2727, whole

Gene Summary

Adenine Count

1232116 bp

Thymine Count

1229996 bp

Guanine Count

991003 bp

Cytosine Count

968209 bp

Genome Length

4421324 bp

Protein-coding Genes

3919 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate-selective porin, oprb familyBACPLE_02961Not AvailablePositive3257560 - 325860039078.0
glycosyl hydrolase family 20, catalytic domain proteinBACPLE_02962Not AvailableNegative3258607 - 326068878613.3
susd family proteinBACPLE_02963Not AvailableNegative3260799 - 326257165823.1
tonb-linked outer membrane protein, susc/raga familyBACPLE_02964Not AvailableNegative3262579 - 3265848120657.0
Trna-serNot AvailableNot AvailablePositive3266166 - 3266250Not Available
muts2 family proteinBACPLE_02966Not AvailablePositive3266398 - 326889994816.0
l-serine ammonia-lyaseBACPLE_02967Not AvailablePositive3269028 - 327017941628.5
6-o-methylguanine dna methyltransferase, dna binding domain proteinBACPLE_02968Not AvailablePositive3270375 - 327088118608.3
had hydrolase, family ia, variant 1BACPLE_02969Not AvailablePositive3270888 - 327153223957.8
ribosomal protein l21BACPLE_02970Not AvailablePositive3271591 - 327199815037.3

Displaying genes 2961 – 2970 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.