Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha amylase, catalytic domain protein | BACPLE_02931 | Not Available | Positive | 3215945 - 3217645 | 65228.9 |
| amp-binding enzyme | BACPLE_02932 | Not Available | Positive | 3217772 - 3219430 | 62792.2 |
| hypothetical protein | BACPLE_02933 | Not Available | Positive | 3219442 - 3220689 | 44070.0 |
| cyclic nucleotide-binding domain protein | BACPLE_02934 | Not Available | Negative | 3220725 - 3221315 | 22760.0 |
| hypothetical protein | BACPLE_02935 | Not Available | Negative | 3221337 - 3222278 | 34828.6 |
| ll-diaminopimelate aminotransferase | BACPLE_02936 | Not Available | Positive | 3222382 - 3223611 | 46020.2 |
| glutamate--ammonia ligase, catalytic domain protein | BACPLE_02937 | Not Available | Positive | 3223667 - 3225856 | 82322.9 |
| trka c-terminal domain protein | BACPLE_02938 | Not Available | Positive | 3226018 - 3227679 | 59480.1 |
| firmicute fructose-1,6-bisphosphatase | BACPLE_02939 | Not Available | Positive | 3227703 - 3229700 | 76727.6 |
| fg-gap repeat protein | BACPLE_02940 | Not Available | Negative | 3229854 - 3231932 | 76389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

