Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02921 | Not Available | Negative | 3205725 - 3205955 | 8745.71 |
| oxidoreductase | BACPLE_02922 | Not Available | Negative | 3206062 - 3206529 | 16991.6 |
| 4-phosphoerythronate dehydrogenase | BACPLE_02923 | Not Available | Negative | 3206542 - 3207501 | 34755.0 |
| atpase, aaa family | BACPLE_02924 | Not Available | Negative | 3207531 - 3208805 | 47385.2 |
| glutamine--trna ligase | BACPLE_02925 | Not Available | Positive | 3209264 - 3211003 | 67089.3 |
| hypothetical protein | BACPLE_02926 | Not Available | Negative | 3211268 - 3212182 | 33417.9 |
| redoxin family protein | BACPLE_02927 | Not Available | Positive | 3212311 - 3212814 | 17809.7 |
| putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BACPLE_02928 | Not Available | Negative | 3212903 - 3213967 | 40295.4 |
| phosphomethylpyrimidine kinase | BACPLE_02929 | Not Available | Positive | 3214050 - 3214883 | 29245.7 |
| [acyl-carrier-protein] s-malonyltransferase | BACPLE_02930 | Not Available | Positive | 3214944 - 3215831 | 31317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

