Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybak/ebsc protein | BACPLE_02911 | Not Available | Negative | 3195939 - 3196421 | 17710.7 |
| excinuclease abc, a subunit | BACPLE_02912 | Not Available | Negative | 3196421 - 3199258 | 105840.0 |
| lysm domain protein | BACPLE_02913 | Not Available | Positive | 3199310 - 3201253 | 73755.0 |
| hypothetical protein | BACPLE_02914 | Not Available | Positive | 3201300 - 3201962 | 24893.5 |
| exodeoxyribonuclease iii | BACPLE_02915 | Not Available | Positive | 3201968 - 3202726 | 29527.9 |
| prokaryotic diacylglycerol kinase | BACPLE_02916 | Not Available | Positive | 3202735 - 3203112 | 13435.7 |
| pap2 family protein | BACPLE_02917 | Not Available | Positive | 3203109 - 3203666 | 20185.4 |
| maoc-like protein | BACPLE_02918 | Not Available | Negative | 3203740 - 3204204 | 17750.6 |
| hypothetical protein | BACPLE_02919 | Not Available | Negative | 3204360 - 3204566 | 7811.56 |
| cation diffusion facilitator family transporter | BACPLE_02920 | Not Available | Positive | 3204945 - 3205652 | 25643.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

