Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 3188650 - 3188721 | Not Available |
| glucose-1-phosphate thymidylyltransferase | BACPLE_02902 | Not Available | Positive | 3188724 - 3189809 | 40517.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BACPLE_02903 | Not Available | Positive | 3189830 - 3190405 | 22235.3 |
| hydrolase, carbon-nitrogen family | BACPLE_02904 | Not Available | Negative | 3190469 - 3192022 | 59994.8 |
| transporter, dicarboxylate/amino acid:cation na+/h+ symporter family protein | BACPLE_02905 | Not Available | Positive | 3192132 - 3193325 | 42456.5 |
| hypothetical protein | BACPLE_02907 | Not Available | Negative | 3193334 - 3193762 | 15688.1 |
| hypothetical protein | BACPLE_02906 | Not Available | Positive | 3193704 - 3193856 | 5971.11 |
| cyclic nucleotide-binding domain protein | BACPLE_02908 | Not Available | Negative | 3193840 - 3194370 | 20899.2 |
| hypothetical protein | BACPLE_02909 | Not Available | Positive | 3194515 - 3194949 | 17051.5 |
| dnaj domain protein | BACPLE_02910 | Not Available | Negative | 3195127 - 3195912 | 29373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

