Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| di-heme cytochrome c peroxidase | BACPLE_02891 | Not Available | Negative | 3178773 - 3180161 | 51099.6 |
| cytochrome c assembly protein | BACPLE_02892 | Not Available | Negative | 3180214 - 3180996 | 29966.9 |
| hypothetical protein | BACPLE_02893 | Not Available | Negative | 3181025 - 3181927 | 33903.6 |
| l-fucose:h+ symporter permease | BACPLE_02894 | Not Available | Negative | 3182051 - 3183364 | 48565.1 |
| carbohydrate kinase, fggy family protein | BACPLE_02895 | Not Available | Negative | 3183407 - 3184750 | 49289.3 |
| class ii aldolase and adducin domain protein | BACPLE_02896 | Not Available | Negative | 3184747 - 3185385 | 23388.2 |
| arabinose isomerase | BACPLE_02897 | Not Available | Negative | 3185458 - 3187284 | 67636.6 |
| transcriptional regulator, gntr family | BACPLE_02898 | Not Available | Negative | 3187335 - 3188321 | 38053.3 |
| Trna-lys | Not Available | Not Available | Positive | 3188462 - 3188537 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3188550 - 3188624 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

