Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase | BACPLE_02871 | Not Available | Positive | 3153994 - 3154731 | 28056.9 |
| hypothetical protein | BACPLE_02872 | Not Available | Negative | 3154728 - 3157367 | 100372.0 |
| hdig domain protein | BACPLE_02873 | Not Available | Negative | 3157559 - 3158095 | 20423.8 |
| hypothetical protein | BACPLE_02874 | Not Available | Positive | 3158147 - 3159334 | 44927.4 |
| threonine synthase | BACPLE_02875 | Not Available | Negative | 3159368 - 3160669 | 48067.6 |
| putative homoserine kinase | BACPLE_02876 | Not Available | Negative | 3160681 - 3161895 | 44579.5 |
| homoserine dehydrogenase | BACPLE_02877 | Not Available | Negative | 3161907 - 3164339 | 88766.6 |
| dna repair protein rada | BACPLE_02878 | Not Available | Positive | 3164736 - 3166109 | 50273.1 |
| tetratricopeptide repeat protein | BACPLE_02879 | Not Available | Negative | 3166201 - 3167667 | 55522.2 |
| hypothetical protein | BACPLE_02880 | Not Available | Negative | 3167686 - 3168513 | 30743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

