Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | BACPLE_02850 | Not Available | Positive | 3130791 - 3131891 | 41159.5 |
| aminotransferase, class i/ii | BACPLE_02852 | Not Available | Negative | 3131966 - 3133201 | 46717.6 |
| prephenate dehydratase | BACPLE_02853 | Not Available | Positive | 3133488 - 3134330 | 31698.2 |
| aminotransferase, class i/ii | BACPLE_02854 | Not Available | Positive | 3134305 - 3135495 | 45311.4 |
| putative 3-deoxy-7-phosphoheptulonate synthase | BACPLE_02855 | Not Available | Positive | 3135519 - 3136589 | 40182.7 |
| putative prephenate dehydrogenase | BACPLE_02856 | Not Available | Positive | 3136602 - 3137375 | 29494.7 |
| hypothetical protein | BACPLE_02857 | Not Available | Negative | 3137463 - 3138983 | 58875.5 |
| hypothetical protein | BACPLE_02858 | Not Available | Negative | 3139122 - 3139796 | 25950.6 |
| hypothetical protein | BACPLE_02859 | Not Available | Negative | 3140184 - 3140717 | 20485.1 |
| hypothetical protein | BACPLE_02860 | Not Available | Negative | 3140728 - 3143052 | 88762.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

