Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antioxidant, ahpc/tsa family | BACPLE_02841 | Not Available | Positive | 3123216 - 3123665 | 16970.4 |
| reca protein | BACPLE_02842 | Not Available | Positive | 3123669 - 3124718 | 37843.3 |
| hypothetical protein | BACPLE_02843 | Not Available | Negative | 3125001 - 3125150 | 6129.4 |
| hypothetical protein | BACPLE_02844 | Not Available | Positive | 3125187 - 3126158 | 37260.5 |
| n-acetylmuramoyl-l-alanine amidase | BACPLE_02845 | Not Available | Negative | 3126233 - 3127033 | 30399.8 |
| redoxin family protein | BACPLE_02846 | Not Available | Negative | 3127033 - 3127575 | 20121.7 |
| dna-binding helix-turn-helix protein | BACPLE_02847 | Not Available | Positive | 3127807 - 3128385 | 21464.4 |
| amp-binding domain protein | BACPLE_02848 | Not Available | Positive | 3128409 - 3129320 | 34785.2 |
| amp-binding domain protein | BACPLE_02849 | Not Available | Positive | 3129342 - 3130061 | 26946.5 |
| hypothetical protein | BACPLE_02851 | Not Available | Negative | 3130133 - 3130792 | 24399.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

