Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02831 | Not Available | Negative | 3114643 - 3114777 | 5118.17 |
| transcriptional regulator, marr family | BACPLE_02832 | Not Available | Positive | 3114855 - 3115295 | 16997.7 |
| outer membrane efflux protein | BACPLE_02833 | Not Available | Positive | 3115276 - 3116598 | 50644.8 |
| auxiliary transport protein, membrane fusion protein (mfp) family protein | BACPLE_02834 | Not Available | Positive | 3116620 - 3117684 | 40430.3 |
| conserved hypothetical protein tigr03982 | BACPLE_02835 | Not Available | Positive | 3117681 - 3119285 | 61772.3 |
| hypothetical protein | BACPLE_02836 | Not Available | Negative | 3119343 - 3119594 | 9440.39 |
| putative phosphoribosylglycinamide formyltransferase 2 | BACPLE_02837 | Not Available | Negative | 3119708 - 3120877 | 43013.6 |
| meta domain protein | BACPLE_02839 | Not Available | Negative | 3120954 - 3121781 | 29550.4 |
| hypothetical protein | BACPLE_02838 | Not Available | Positive | 3121755 - 3121886 | 5335.48 |
| saccharopine dehydrogenase | BACPLE_02840 | Not Available | Positive | 3121928 - 3123121 | 44889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

