Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02821 | Not Available | Positive | 3104665 - 3104826 | 6385.62 |
| hypothetical protein | BACPLE_02822 | Not Available | Positive | 3104834 - 3105127 | 11487.9 |
| hypothetical protein | BACPLE_02823 | Not Available | Positive | 3105152 - 3105457 | 12173.5 |
| ymda/ytgf family protein | BACPLE_02824 | Not Available | Positive | 3105560 - 3107095 | 57403.5 |
| phospholipase, patatin family | BACPLE_02825 | Not Available | Negative | 3107139 - 3107996 | 33012.3 |
| aminopeptidase p domain protein | BACPLE_02826 | Not Available | Positive | 3108038 - 3109522 | 55631.9 |
| peptidase c1-like family | BACPLE_02827 | Not Available | Positive | 3109515 - 3110756 | 46482.2 |
| hypothetical protein | BACPLE_02828 | Not Available | Positive | 3110862 - 3110993 | 5216.44 |
| single-stranded-dna-specific exonuclease recj | BACPLE_02829 | Not Available | Positive | 3110990 - 3112711 | 64824.4 |
| atp-dependent dna helicase, recq family | BACPLE_02830 | Not Available | Positive | 3112718 - 3114613 | 73420.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

