Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial cytochrome ubiquinol oxidase | BACPLE_02811 | Not Available | Negative | 3095010 - 3096506 | 55652.5 |
| hypothetical protein | BACPLE_02813 | Not Available | Negative | 3096548 - 3096766 | 8827.07 |
| type i secretion outer membrane protein, tolc family | BACPLE_02812 | Not Available | Positive | 3096747 - 3098252 | 56835.5 |
| efflux transporter, rnd family, mfp subunit | BACPLE_02814 | Not Available | Positive | 3098265 - 3099488 | 44086.8 |
| abc transporter, atp-binding protein | BACPLE_02815 | Not Available | Positive | 3099501 - 3100247 | 27343.8 |
| efflux abc transporter, permease protein | BACPLE_02816 | Not Available | Positive | 3100271 - 3101491 | 44285.3 |
| histidine kinase | BACPLE_02817 | Not Available | Positive | 3101633 - 3102709 | 41737.7 |
| response regulator receiver domain protein | BACPLE_02818 | Not Available | Positive | 3102706 - 3103437 | 27970.3 |
| radical sam domain protein | BACPLE_02819 | Not Available | Negative | 3103760 - 3104305 | 20414.7 |
| putative queuosine biosynthesis protein qued | BACPLE_02820 | Not Available | Negative | 3104292 - 3104624 | 12757.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

