Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02801 | Not Available | Positive | 3080176 - 3080379 | 7166.8 |
| hypothetical protein | BACPLE_02802 | Not Available | Positive | 3080456 - 3080824 | 14004.0 |
| hypothetical protein | BACPLE_02803 | Not Available | Positive | 3080829 - 3081098 | 10619.0 |
| wd40-like protein | BACPLE_02804 | Not Available | Positive | 3081098 - 3084349 | 122883.0 |
| glycosyl hydrolase, family 88 | BACPLE_02805 | Not Available | Negative | 3084447 - 3085667 | 45936.4 |
| glycosyl hydrolase, family 43 | BACPLE_02806 | Not Available | Negative | 3085680 - 3087290 | 61009.3 |
| hypothetical protein | BACPLE_02807 | Not Available | Negative | 3087480 - 3089417 | 73658.9 |
| o-glycosyl hydrolase family 30 | BACPLE_02808 | Not Available | Negative | 3089496 - 3090986 | 57087.9 |
| glycosyl hydrolase, family 43 | BACPLE_02809 | Not Available | Negative | 3090998 - 3093499 | 95802.2 |
| cytochrome d ubiquinol oxidase, subunit ii | BACPLE_02810 | Not Available | Negative | 3093825 - 3094976 | 43416.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

