Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | BACPLE_02791 | Not Available | Negative | 3068303 - 3069574 | 48469.5 |
| putative glycogen debranching enzyme, archaeal type | BACPLE_02792 | Not Available | Negative | 3069590 - 3071527 | 74438.7 |
| serine--trna ligase | BACPLE_02793 | Not Available | Negative | 3071804 - 3073078 | 47749.3 |
| hypothetical protein | BACPLE_02794 | Not Available | Negative | 3073181 - 3074398 | 46467.2 |
| 3-deoxy-8-phosphooctulonate synthase | BACPLE_02795 | Not Available | Negative | 3074402 - 3075205 | 29365.8 |
| lipid kinase, yegs/rv2252/bmru family | BACPLE_02796 | Not Available | Negative | 3075207 - 3076139 | 35272.9 |
| trna dimethylallyltransferase | BACPLE_02797 | Not Available | Negative | 3076146 - 3077105 | 36961.8 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | BACPLE_02798 | Not Available | Negative | 3077181 - 3078191 | 35959.2 |
| hypothetical protein | BACPLE_02799 | Not Available | Negative | 3078425 - 3079378 | 34966.3 |
| sporulation and cell division repeat protein | BACPLE_02800 | Not Available | Negative | 3079487 - 3080125 | 23306.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

