Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_00244 | Not Available | Negative | 267954 - 270527 | 99066.9 |
| hypothetical protein | BACPLE_00245 | Not Available | Negative | 270645 - 271541 | 33466.7 |
| leucine--trna ligase | BACPLE_00246 | Not Available | Negative | 271612 - 274446 | 108032.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_00247 | Not Available | Positive | 274587 - 277025 | 92198.1 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_00248 | Not Available | Negative | 277099 - 280092 | 112970.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00249 | Not Available | Positive | 280719 - 283850 | 114981.0 |
| susd family protein | BACPLE_00250 | Not Available | Positive | 283869 - 285965 | 78803.9 |
| hypothetical protein | BACPLE_00251 | Not Available | Positive | 286122 - 289379 | 123619.0 |
| beta-galactosidase trimerization domain protein | BACPLE_00252 | Not Available | Negative | 289467 - 291539 | 80068.8 |
| hypothetical protein | BACPLE_00253 | Not Available | Positive | 291730 - 292353 | 22969.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

