Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | BACPLE_02781 | Not Available | Positive | 3058764 - 3060371 | 59896.7 |
| hypothetical protein | BACPLE_02782 | Not Available | Positive | 3060358 - 3060501 | 5530.67 |
| hypothetical protein | BACPLE_02783 | Not Available | Negative | 3060585 - 3060824 | 9121.88 |
| hypothetical protein | BACPLE_02784 | Not Available | Positive | 3060854 - 3060997 | 5541.92 |
| hypothetical protein | BACPLE_02785 | Not Available | Negative | 3061331 - 3061459 | 4857.99 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02786 | Not Available | Positive | 3061540 - 3064236 | 98617.1 |
| susd family protein | BACPLE_02787 | Not Available | Positive | 3064249 - 3065865 | 61988.0 |
| cyclic nucleotide-binding domain protein | BACPLE_02788 | Not Available | Positive | 3065875 - 3066477 | 23472.4 |
| hypothetical protein | BACPLE_02789 | Not Available | Negative | 3066581 - 3066736 | 5991.32 |
| glycosyl hydrolase, family 57 | BACPLE_02790 | Not Available | Negative | 3066912 - 3068288 | 52552.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

