Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02761 | Not Available | Positive | 3043451 - 3043597 | 5692.08 |
| hypothetical protein | BACPLE_02763 | Not Available | Negative | 3043787 - 3044452 | 24650.7 |
| site-specific recombinase, phage integrase family | BACPLE_02762 | Not Available | Positive | 3044435 - 3045040 | 22646.6 |
| reverse transcriptase (rna-dependent dna polymerase) | BACPLE_02764 | Not Available | Positive | 3045591 - 3047399 | 70461.2 |
| hypothetical protein | BACPLE_02765 | Not Available | Positive | 3047591 - 3048127 | 21033.1 |
| hypothetical protein | BACPLE_02766 | Not Available | Positive | 3048094 - 3048897 | 30740.0 |
| hypothetical protein | BACPLE_02767 | Not Available | Negative | 3049021 - 3049335 | 11831.1 |
| rna polymerase sigma factor, sigma-70 family | BACPLE_02768 | Not Available | Positive | 3049578 - 3050165 | 23355.0 |
| hypothetical protein | BACPLE_02769 | Not Available | Positive | 3050204 - 3050596 | 14976.2 |
| dna binding domain, excisionase family | BACPLE_02770 | Not Available | Negative | 3051119 - 3051352 | 8930.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

