Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02691 | Not Available | Positive | 2972533 - 2972865 | 12635.6 |
| hypothetical protein | BACPLE_02692 | Not Available | Positive | 2973024 - 2974112 | 41958.6 |
| efflux transporter, rnd family, mfp subunit | BACPLE_02693 | Not Available | Positive | 2974124 - 2975200 | 38790.8 |
| cation diffusion facilitator family transporter | BACPLE_02694 | Not Available | Positive | 2975215 - 2977122 | 71579.5 |
| d12 class n6 adenine-specific dna methyltransferase | BACPLE_02695 | Not Available | Negative | 2977209 - 2978069 | 33162.1 |
| putative thymidylate synthase | BACPLE_02696 | Not Available | Negative | 2978066 - 2978704 | 24575.8 |
| hypothetical protein | BACPLE_02697 | Not Available | Negative | 2978771 - 2979013 | 9288.34 |
| hypothetical protein | BACPLE_02698 | Not Available | Negative | 2979199 - 2979684 | 18643.6 |
| hypothetical protein | BACPLE_02699 | Not Available | Negative | 2979681 - 2980982 | 50873.1 |
| hypothetical protein | BACPLE_02700 | Not Available | Negative | 2981358 - 2981591 | 8550.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

