Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_00234 | Not Available | Positive | 255590 - 255976 | 15141.2 |
| hypothetical protein | BACPLE_00235 | Not Available | Negative | 256050 - 256172 | 4646.77 |
| gtp-binding protein ychf | BACPLE_00236 | Not Available | Positive | 256179 - 257282 | 40904.9 |
| 2-dehydropantoate 2-reductase | BACPLE_00237 | Not Available | Positive | 257349 - 258260 | 33139.3 |
| putative chloramphenicol o-acetyltransferase | BACPLE_00238 | Not Available | Positive | 258257 - 258907 | 25081.7 |
| transcriptional regulatory protein, c-terminal domain protein | BACPLE_00239 | Not Available | Positive | 259074 - 260096 | 38965.2 |
| susd family protein | BACPLE_00240 | Not Available | Negative | 260093 - 261583 | 55168.6 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_00241 | Not Available | Negative | 261598 - 264675 | 113830.0 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | BACPLE_00242 | Not Available | Negative | 264854 - 265486 | 23323.0 |
| glycosyl hydrolase family 20, catalytic domain protein | BACPLE_00243 | Not Available | Negative | 265584 - 267920 | 86850.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

