Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase | BACPLE_02661 | Not Available | Positive | 2945971 - 2947911 | 71632.3 |
| hypothetical protein | BACPLE_02662 | Not Available | Negative | 2947995 - 2948948 | 36103.4 |
| putative shikimate dehydrogenase | BACPLE_02663 | Not Available | Negative | 2948963 - 2949706 | 27803.6 |
| ubiquinone/menaquinone biosynthesis methyltransferase | BACPLE_02664 | Not Available | Negative | 2949725 - 2950465 | 27967.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BACPLE_02665 | Not Available | Negative | 2950544 - 2951491 | 35940.9 |
| phoh family protein | BACPLE_02666 | Not Available | Negative | 2951533 - 2952531 | 37149.8 |
| peptidase, c69 family | BACPLE_02667 | Not Available | Negative | 2952623 - 2954272 | 62159.9 |
| peptidase, m23 family | BACPLE_02668 | Not Available | Negative | 2954316 - 2955977 | 62591.4 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | BACPLE_02669 | Not Available | Positive | 2956042 - 2957892 | 68521.7 |
| hypothetical protein | BACPLE_02670 | Not Available | Negative | 2957924 - 2958061 | 5385.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

