Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron chelate uptake abc transporter, fect family, permease protein | BACPLE_02591 | Not Available | Positive | 2888928 - 2889908 | 34200.6 |
| abc transporter, atp-binding protein | BACPLE_02592 | Not Available | Positive | 2889905 - 2890672 | 28529.0 |
| hypothetical protein | BACPLE_02593 | Not Available | Positive | 2890765 - 2890902 | 5340.05 |
| hypothetical protein | BACPLE_02594 | Not Available | Negative | 2890961 - 2891236 | 10582.8 |
| hypothetical protein | BACPLE_02595 | Not Available | Negative | 2891395 - 2892708 | 50045.2 |
| hypothetical protein | BACPLE_02596 | Not Available | Negative | 2892961 - 2894688 | 64912.1 |
| hypothetical protein | BACPLE_02597 | Not Available | Negative | 2894729 - 2896570 | 67981.9 |
| hypothetical protein | BACPLE_02598 | Not Available | Negative | 2896699 - 2897814 | 40466.7 |
| oxidoreductase, aldo/keto reductase family protein | BACPLE_02599 | Not Available | Positive | 2897866 - 2898882 | 37406.9 |
| oxidoreductase, aldo/keto reductase family protein | BACPLE_02600 | Not Available | Positive | 2898898 - 2899746 | 32377.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

