Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter gate domain protein | BACPLE_00224 | Not Available | Positive | 243688 - 244920 | 44143.2 |
| translation metalloprotein ybey | BACPLE_00225 | Not Available | Positive | 244929 - 245351 | 16149.3 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | BACPLE_00226 | Not Available | Positive | 245389 - 247260 | 69555.9 |
| adenine phosphoribosyltransferase | BACPLE_00227 | Not Available | Positive | 247318 - 247842 | 19287.6 |
| excinuclease abc, c subunit | BACPLE_00228 | Not Available | Positive | 247947 - 249779 | 70303.5 |
| d-tyrosyl-trna(tyr) deacylase | BACPLE_00229 | Not Available | Positive | 249812 - 250264 | 16484.1 |
| mazg nucleotide pyrophosphohydrolase domain protein | BACPLE_00230 | Not Available | Positive | 250267 - 250587 | 12174.5 |
| deoxyribose-phosphate aldolase | BACPLE_00231 | Not Available | Positive | 250593 - 251597 | 37321.5 |
| polyprenyl synthetase | BACPLE_00232 | Not Available | Negative | 251599 - 252579 | 35952.4 |
| dna-directed dna polymerase | BACPLE_00233 | Not Available | Positive | 252641 - 255436 | 105787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

