Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna binding domain, excisionase family | BACPLE_02521 | Not Available | Positive | 2829074 - 2829478 | 15856.3 |
| hypothetical protein | BACPLE_02522 | Not Available | Positive | 2829456 - 2830580 | 42310.5 |
| hypothetical protein | BACPLE_02523 | Not Available | Positive | 2830662 - 2831549 | 34070.6 |
| hypothetical protein | BACPLE_02524 | Not Available | Positive | 2831790 - 2832236 | 16579.6 |
| hypothetical protein | BACPLE_02525 | Not Available | Positive | 2832238 - 2832564 | 11554.5 |
| hypothetical protein | BACPLE_02526 | Not Available | Positive | 2832641 - 2833006 | 12980.6 |
| hypothetical protein | BACPLE_02527 | Not Available | Positive | 2833019 - 2833315 | 10709.5 |
| conjugation system atpase, trag family | BACPLE_02528 | Not Available | Positive | 2833356 - 2836124 | 106483.0 |
| hypothetical protein | BACPLE_02529 | Not Available | Positive | 2836148 - 2836558 | 16147.3 |
| hypothetical protein | BACPLE_02530 | Not Available | Positive | 2836590 - 2839139 | 96579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

