Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldh | BACPLE_02511 | Not Available | Negative | 2817262 - 2817924 | 24922.8 |
| psp1 c-terminal domain protein | BACPLE_02512 | Not Available | Negative | 2817800 - 2819197 | 52165.8 |
| putative dna polymerase iii, delta' subunit | BACPLE_02513 | Not Available | Negative | 2819204 - 2820334 | 43341.1 |
| phospholipase d domain protein | BACPLE_02514 | Not Available | Negative | 2820438 - 2821727 | 49144.0 |
| hypothetical protein | BACPLE_02515 | Not Available | Negative | 2822048 - 2822194 | 5976.53 |
| lactate/malate dehydrogenase, nad binding domain protein | BACPLE_02516 | Not Available | Positive | 2822310 - 2823311 | 35725.0 |
| pap2 family protein | BACPLE_02517 | Not Available | Positive | 2823614 - 2825098 | 55744.9 |
| response regulator receiver domain protein | BACPLE_02518 | Not Available | Negative | 2825112 - 2826665 | 57792.2 |
| site-specific recombinase, phage integrase family | BACPLE_02519 | Not Available | Positive | 2826872 - 2828002 | 43315.8 |
| hypothetical protein | BACPLE_02520 | Not Available | Positive | 2828360 - 2828905 | 20365.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

