Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aicarft/impchase bienzyme | BACPLE_02501 | Not Available | Negative | 2806397 - 2807575 | 44100.4 |
| carbonate dehydratase | BACPLE_02502 | Not Available | Positive | 2807733 - 2808281 | 20581.9 |
| hypothetical protein | BACPLE_02503 | Not Available | Negative | 2808343 - 2810637 | 85088.3 |
| hypothetical protein | BACPLE_02504 | Not Available | Positive | 2810715 - 2810849 | 5124.3 |
| mgs-like domain protein | BACPLE_02505 | Not Available | Positive | 2810882 - 2811475 | 21904.3 |
| cell shape determining protein, mreb/mrl family | BACPLE_02506 | Not Available | Positive | 2811548 - 2812570 | 36950.9 |
| rod shape-determining protein mrec | BACPLE_02507 | Not Available | Positive | 2812660 - 2813511 | 31688.8 |
| rod shape-determining protein mred | BACPLE_02508 | Not Available | Positive | 2813542 - 2814039 | 19128.0 |
| penicillin-binding protein 2 | BACPLE_02509 | Not Available | Positive | 2814039 - 2815889 | 69310.1 |
| putative rod shape-determining protein roda | BACPLE_02510 | Not Available | Positive | 2815879 - 2817327 | 53934.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

