Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rmuc domain protein | BACPLE_02471 | Not Available | Negative | 2774517 - 2775926 | 54025.3 |
| histidine--trna ligase | BACPLE_02472 | Not Available | Negative | 2776056 - 2777420 | 50181.6 |
| putative neutral zinc metallopeptidase | BACPLE_02473 | Not Available | Negative | 2777503 - 2778180 | 24586.1 |
| alpha-galactosidase | BACPLE_02474 | Not Available | Negative | 2778241 - 2779869 | 61613.6 |
| dna topoisomerase | BACPLE_02475 | Not Available | Positive | 2779873 - 2782125 | 84966.5 |
| acyltransferase | BACPLE_02476 | Not Available | Negative | 2782218 - 2783369 | 42897.6 |
| cyclic nucleotide-binding domain protein | BACPLE_02477 | Not Available | Negative | 2783461 - 2784027 | 22506.1 |
| mate efflux family protein | BACPLE_02478 | Not Available | Negative | 2784202 - 2785575 | 49765.4 |
| tetratricopeptide repeat protein | BACPLE_02479 | Not Available | Positive | 2786136 - 2788136 | 76710.8 |
| sua5/ycio/yrdc/ywlc family protein | BACPLE_02480 | Not Available | Positive | 2788105 - 2788797 | 26197.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

