Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | BACPLE_02461 | Not Available | Negative | 2763932 - 2764396 | 17901.9 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | BACPLE_02462 | Not Available | Positive | 2764566 - 2765852 | 46507.2 |
| putative phenylacetic acid degradation protein paad | BACPLE_02463 | Not Available | Negative | 2765926 - 2766336 | 14766.7 |
| hypothetical protein | BACPLE_02464 | Not Available | Negative | 2766342 - 2767394 | 40258.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | BACPLE_02465 | Not Available | Positive | 2767495 - 2768763 | 48220.6 |
| hydrolase, nudix family | BACPLE_02466 | Not Available | Positive | 2768782 - 2769285 | 18932.1 |
| cytidine and deoxycytidylate deaminase zinc-binding region | BACPLE_02467 | Not Available | Negative | 2769475 - 2769942 | 17075.2 |
| chaperonin grol | BACPLE_02468 | Not Available | Negative | 2770123 - 2771760 | 58232.3 |
| chaperonin gros | BACPLE_02469 | Not Available | Negative | 2771803 - 2772075 | 9742.99 |
| polysaccharide lyase family 8, super-sandwich domain protein | BACPLE_02470 | Not Available | Positive | 2772357 - 2774450 | 79381.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

