Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | BACPLE_02441 | Not Available | Positive | 2738463 - 2740298 | 69656.1 |
| hypothetical protein | BACPLE_02442 | Not Available | Negative | 2740295 - 2741959 | 61605.6 |
| sodium ion-translocating decarboxylase, beta subunit | BACPLE_02443 | Not Available | Negative | 2742112 - 2743347 | 44260.9 |
| biotin-requiring enzyme | BACPLE_02444 | Not Available | Negative | 2743347 - 2745206 | 69052.6 |
| sodium pump decarboxylase, gamma subunit | BACPLE_02445 | Not Available | Negative | 2745236 - 2745493 | 8942.43 |
| nitroreductase family protein | BACPLE_02446 | Not Available | Negative | 2745638 - 2746153 | 19629.7 |
| hypothetical protein | BACPLE_02447 | Not Available | Negative | 2746153 - 2746815 | 25778.6 |
| hypothetical protein | BACPLE_02448 | Not Available | Negative | 2746796 - 2746927 | 5266.37 |
| iga peptidase m64 | BACPLE_02449 | Not Available | Positive | 2747084 - 2748721 | 60661.2 |
| trka c-terminal domain protein | BACPLE_02450 | Not Available | Negative | 2749019 - 2750698 | 60670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

