Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02420 | Not Available | Positive | 2719130 - 2719795 | 25971.3 |
| hypothetical protein | BACPLE_02421 | Not Available | Positive | 2719911 - 2720324 | 16198.9 |
| putative phage conserved hypothetical protein tigr01671 | BACPLE_02422 | Not Available | Positive | 2720327 - 2720758 | 16163.4 |
| vrr-nuc domain protein | BACPLE_02423 | Not Available | Positive | 2721050 - 2721556 | 19321.6 |
| hypothetical protein | BACPLE_02424 | Not Available | Negative | 2721594 - 2722163 | 21838.5 |
| n-acetylmuramoyl-l-alanine amidase | BACPLE_02425 | Not Available | Negative | 2722170 - 2722763 | 21873.1 |
| toxin secretion/phage lysis holin | BACPLE_02426 | Not Available | Negative | 2722760 - 2723218 | 17100.3 |
| hypothetical protein | BACPLE_02427 | Not Available | Negative | 2723218 - 2723526 | 11087.8 |
| hypothetical protein | BACPLE_02428 | Not Available | Negative | 2723781 - 2724284 | 19459.1 |
| hypothetical protein | BACPLE_02429 | Not Available | Negative | 2724271 - 2725572 | 51044.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

