Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-1,2-mannosidase | BACPLE_02380 | Not Available | Negative | 2685953 - 2688286 | 88424.4 |
| glycosyl hydrolase family 20, catalytic domain protein | BACPLE_02381 | Not Available | Negative | 2688468 - 2690744 | 86514.2 |
| transcriptional regulator, arac family | BACPLE_02382 | Not Available | Negative | 2691020 - 2693746 | 104534.0 |
| hypothetical protein | BACPLE_02383 | Not Available | Negative | 2693767 - 2693970 | 7434.15 |
| hypothetical protein | BACPLE_02384 | Not Available | Positive | 2694259 - 2695176 | 34547.2 |
| hypothetical protein | BACPLE_02385 | Not Available | Negative | 2695370 - 2695543 | 6544.16 |
| peptidyl-prolyl cis-trans isomerase, cyclophilin-type | BACPLE_02386 | Not Available | Positive | 2695605 - 2696399 | 29249.8 |
| peptidase m16 inactive domain protein | BACPLE_02387 | Not Available | Positive | 2696412 - 2697650 | 47228.7 |
| mate efflux family protein | BACPLE_02388 | Not Available | Positive | 2697647 - 2698972 | 48803.7 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_02389 | Not Available | Positive | 2698976 - 2701504 | 95469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

