Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02370 | Not Available | Negative | 2665486 - 2668503 | 110977.0 |
| hypothetical protein | BACPLE_02371 | Not Available | Negative | 2668586 - 2670766 | 83289.2 |
| alpha amylase, catalytic domain protein | BACPLE_02372 | Not Available | Negative | 2670945 - 2672798 | 71151.1 |
| hypothetical protein | BACPLE_02373 | Not Available | Positive | 2672977 - 2674569 | 61719.5 |
| plant basic secretory protein | BACPLE_02374 | Not Available | Negative | 2674661 - 2675869 | 44435.6 |
| hypothetical protein | BACPLE_02375 | Not Available | Negative | 2675886 - 2677496 | 60118.9 |
| susd family protein | BACPLE_02376 | Not Available | Negative | 2677522 - 2679477 | 75756.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02377 | Not Available | Negative | 2679489 - 2682812 | 122721.0 |
| putative alpha-1,2-mannosidase | BACPLE_02378 | Not Available | Negative | 2682824 - 2685139 | 87674.6 |
| plant basic secretory protein | BACPLE_02379 | Not Available | Negative | 2685156 - 2685950 | 29461.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

