Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-5'-monophosphate dehydrogenase | BACPLE_02360 | Not Available | Negative | 2652440 - 2653915 | 52665.8 |
| atp-dependent dna helicase recq | BACPLE_02361 | Not Available | Negative | 2654079 - 2656262 | 82011.3 |
| atp-dependent clp protease, atp-binding subunit clpx | BACPLE_02362 | Not Available | Negative | 2656405 - 2657586 | 43866.3 |
| endopeptidase clp | BACPLE_02363 | Not Available | Negative | 2657687 - 2658361 | 24972.9 |
| trigger factor | BACPLE_02364 | Not Available | Negative | 2658517 - 2659863 | 51355.0 |
| abc transporter, atp-binding protein | BACPLE_02365 | Not Available | Negative | 2660071 - 2660844 | 29060.2 |
| hypothetical protein | BACPLE_02366 | Not Available | Negative | 2660841 - 2661584 | 27444.5 |
| abc transporter, atp-binding protein | BACPLE_02367 | Not Available | Positive | 2661724 - 2662542 | 30895.2 |
| hypothetical protein | BACPLE_02368 | Not Available | Negative | 2662612 - 2663775 | 42627.9 |
| susd family protein | BACPLE_02369 | Not Available | Negative | 2663796 - 2665463 | 63156.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

