Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BACPLE_02330 | Not Available | Negative | 2610341 - 2611729 | 52314.1 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02331 | Not Available | Negative | 2611757 - 2614912 | 113864.0 |
| hypothetical protein | BACPLE_02332 | Not Available | Negative | 2615000 - 2615230 | 8891.38 |
| site-specific recombinase, phage integrase family | BACPLE_02333 | Not Available | Positive | 2615253 - 2616416 | 46003.8 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02334 | Not Available | Positive | 2616871 - 2619672 | 103187.0 |
| susd family protein | BACPLE_02335 | Not Available | Positive | 2619692 - 2621218 | 56152.4 |
| hypothetical protein | BACPLE_02336 | Not Available | Negative | 2621411 - 2622316 | 33587.0 |
| hypothetical protein | BACPLE_02337 | Not Available | Positive | 2622433 - 2627067 | 171672.0 |
| outer membrane protein, omp85 family | BACPLE_02338 | Not Available | Positive | 2627039 - 2629372 | 88946.1 |
| hypothetical protein | BACPLE_02339 | Not Available | Positive | 2629435 - 2629878 | 16900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

