Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, outer membrane factor lipoprotein, nodt family | BACPLE_02320 | Not Available | Positive | 2595482 - 2596729 | 45263.8 |
| hypothetical protein | BACPLE_02321 | Not Available | Negative | 2596829 - 2598208 | 52096.1 |
| hypothetical protein | BACPLE_02322 | Not Available | Negative | 2598196 - 2598339 | 5743.24 |
| peptidase family m13 | BACPLE_02323 | Not Available | Negative | 2598485 - 2600524 | 76138.0 |
| abc transporter, atp-binding protein | BACPLE_02324 | Not Available | Negative | 2600556 - 2602490 | 73742.6 |
| sodium bile acid symporter family protein | BACPLE_02325 | Not Available | Negative | 2602566 - 2603537 | 35677.8 |
| hydrolyase, tartrate beta subunit/fumarate domain protein, fe-s type | BACPLE_02326 | Not Available | Negative | 2603690 - 2605333 | 60539.5 |
| redoxin family protein | BACPLE_02327 | Not Available | Negative | 2605433 - 2606935 | 55936.1 |
| hypothetical protein | BACPLE_02328 | Not Available | Negative | 2606998 - 2608989 | 74622.6 |
| gtp-binding protein hflx | BACPLE_02329 | Not Available | Negative | 2609001 - 2610257 | 47674.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

