Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_02310 | Not Available | Positive | 2581578 - 2583647 | 78550.2 |
| hypothetical protein | BACPLE_02311 | Not Available | Negative | 2584121 - 2584432 | 12155.8 |
| cna protein b-type domain protein | BACPLE_02312 | Not Available | Negative | 2584453 - 2587227 | 102619.0 |
| histidine kinase | BACPLE_02313 | Not Available | Positive | 2587406 - 2588437 | 40657.4 |
| lyttr dna-binding domain protein | BACPLE_02314 | Not Available | Positive | 2588434 - 2589138 | 26781.5 |
| response regulator receiver domain protein | BACPLE_02315 | Not Available | Negative | 2589156 - 2589878 | 26890.9 |
| histidine kinase | BACPLE_02316 | Not Available | Negative | 2589871 - 2590884 | 39084.5 |
| hypothetical protein | BACPLE_02317 | Not Available | Negative | 2590890 - 2591039 | 5399.58 |
| efflux transporter, rnd family, mfp subunit | BACPLE_02318 | Not Available | Positive | 2591063 - 2592190 | 40662.3 |
| rnd transporter, hae1 family | BACPLE_02319 | Not Available | Positive | 2592200 - 2595343 | 114654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

