Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine-dependent methyltransferase, yral family | BACPLE_02290 | Not Available | Positive | 2554008 - 2554682 | 24975.3 |
| hypothetical protein | BACPLE_02291 | Not Available | Positive | 2554707 - 2555561 | 32308.3 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_02292 | Not Available | Negative | 2555652 - 2557469 | 69642.8 |
| two component regulator propeller | BACPLE_02293 | Not Available | Positive | 2557590 - 2558108 | 19922.0 |
| response regulator receiver domain protein | BACPLE_02294 | Not Available | Positive | 2558065 - 2561778 | 142676.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_02295 | Not Available | Positive | 2561937 - 2564948 | 110265.0 |
| hypothetical protein | BACPLE_02296 | Not Available | Positive | 2564986 - 2566629 | 61313.5 |
| hypothetical protein | BACPLE_02297 | Not Available | Positive | 2566700 - 2568214 | 56529.8 |
| nad dependent epimerase/dehydratase family protein | BACPLE_02298 | Not Available | Negative | 2568312 - 2569265 | 35145.9 |
| glycine c-acetyltransferase | BACPLE_02299 | Not Available | Positive | 2569396 - 2570586 | 43864.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

