Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02280 | Not Available | Positive | 2542258 - 2543334 | 41916.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_02281 | Not Available | Negative | 2543331 - 2547308 | 150323.0 |
| 4fe-4s binding domain protein | BACPLE_02282 | Not Available | Negative | 2547399 - 2547566 | 5631.56 |
| beta-lactamase | BACPLE_02283 | Not Available | Negative | 2547688 - 2550657 | 110048.0 |
| ser/thr phosphatase family protein | BACPLE_02284 | Not Available | Negative | 2550673 - 2551533 | 32167.8 |
| 5'-nucleotidase, c-terminal domain protein | BACPLE_02286 | Not Available | Negative | 2551530 - 2552357 | 29691.0 |
| hypothetical protein | BACPLE_02285 | Not Available | Positive | 2552356 - 2552526 | 6692.58 |
| ribosomal protein l19 | BACPLE_02287 | Not Available | Positive | 2552540 - 2552893 | 13103.2 |
| Trna-lys | Not Available | Not Available | Positive | 2553028 - 2553100 | Not Available |
| thymidine kinase | BACPLE_02289 | Not Available | Negative | 2553220 - 2553828 | 22718.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

