Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02249 | Not Available | Negative | 2502844 - 2503044 | 8068.8 |
| hypothetical protein | BACPLE_02250 | Not Available | Positive | 2503203 - 2503337 | 4808.71 |
| hypothetical protein | BACPLE_02251 | Not Available | Positive | 2503334 - 2503489 | 6078.55 |
| dna binding domain, excisionase family | BACPLE_02253 | Not Available | Negative | 2504981 - 2505341 | 13563.3 |
| hypothetical protein | BACPLE_02254 | Not Available | Negative | 2505482 - 2506312 | 32295.9 |
| site-specific recombinase, phage integrase family | BACPLE_02255 | Not Available | Negative | 2506541 - 2507659 | 43461.9 |
| dna binding domain, excisionase family | BACPLE_02256 | Not Available | Negative | 2507791 - 2508732 | 36522.2 |
| dna/rna non-specific endonuclease | BACPLE_02257 | Not Available | Positive | 2509111 - 2510712 | 59797.9 |
| hypothetical protein | BACPLE_02258 | Not Available | Positive | 2510743 - 2512674 | 69451.9 |
| tonb-dependent receptor | BACPLE_02259 | Not Available | Positive | 2512783 - 2515500 | 102688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

