Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthetase | BACPLE_02229 | Not Available | Positive | 2477245 - 2478525 | 48677.6 |
| hypothetical protein | BACPLE_02230 | Not Available | Positive | 2478642 - 2478818 | 6410.83 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BACPLE_02231 | Not Available | Positive | 2478974 - 2483401 | 169402.0 |
| response regulator receiver domain protein | BACPLE_02232 | Not Available | Positive | 2483433 - 2484155 | 27524.6 |
| abgt putative transporter family protein | BACPLE_02233 | Not Available | Positive | 2484145 - 2484828 | 24980.6 |
| antioxidant, ahpc/tsa family | BACPLE_02234 | Not Available | Positive | 2484904 - 2486004 | 40304.6 |
| amino acid/peptide transporter | BACPLE_02235 | Not Available | Negative | 2486098 - 2487642 | 56934.2 |
| tetratricopeptide repeat protein | BACPLE_02236 | Not Available | Negative | 2487777 - 2488397 | 23539.9 |
| mucin-desulfating sulfatase | BACPLE_02237 | Not Available | Positive | 2488606 - 2489688 | 41571.9 |
| acyltransferase | BACPLE_02238 | Not Available | Negative | 2489854 - 2490411 | 21351.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

