Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit | BACPLE_02199 | Not Available | Negative | 2436081 - 2436623 | 19939.7 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | BACPLE_02200 | Not Available | Negative | 2436639 - 2437412 | 28287.3 |
| hypothetical protein | BACPLE_02201 | Not Available | Negative | 2437431 - 2437604 | 6710.54 |
| pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine dip-binding domain protein | BACPLE_02202 | Not Available | Negative | 2437608 - 2438717 | 40462.1 |
| 4fe-4s binding domain protein | BACPLE_02203 | Not Available | Negative | 2438720 - 2438950 | 8214.1 |
| tetratricopeptide repeat protein | BACPLE_02204 | Not Available | Negative | 2438963 - 2439241 | 10564.3 |
| glutamate synthase (nadph), homotetrameric | BACPLE_02205 | Not Available | Positive | 2439595 - 2441889 | 82500.4 |
| hypothetical protein | BACPLE_02207 | Not Available | Negative | 2442054 - 2443097 | 39158.6 |
| hypothetical protein | BACPLE_02206 | Not Available | Positive | 2443096 - 2443215 | 4545.02 |
| ribose-5-phosphate isomerase b | BACPLE_02208 | Not Available | Negative | 2443325 - 2443759 | 16074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

