Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m3 | BACPLE_00184 | Not Available | Negative | 194594 - 196687 | 78877.7 |
| endonuclease/exonuclease/phosphatase family protein | BACPLE_00185 | Not Available | Negative | 196706 - 197764 | 39865.5 |
| peptidase, s54 family | BACPLE_00186 | Not Available | Negative | 197761 - 198654 | 33950.8 |
| peptidase, s54 family | BACPLE_00187 | Not Available | Negative | 198629 - 199303 | 25245.5 |
| wbqc-like protein | BACPLE_00188 | Not Available | Negative | 199370 - 200020 | 25894.8 |
| signal peptidase i | BACPLE_00189 | Not Available | Negative | 200037 - 200954 | 34766.9 |
| signal peptidase i | BACPLE_00190 | Not Available | Negative | 200958 - 202382 | 55057.4 |
| dihydrodipicolinate reductase | BACPLE_00191 | Not Available | Negative | 202385 - 203140 | 27319.6 |
| hypothetical protein | BACPLE_00192 | Not Available | Positive | 203224 - 204495 | 49090.8 |
| hypothetical protein | BACPLE_00193 | Not Available | Negative | 204718 - 205344 | 24203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

