Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02159 | Not Available | Positive | 2392047 - 2394131 | 79878.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BACPLE_02160 | Not Available | Negative | 2394236 - 2395060 | 30893.0 |
| replicative dna helicase | BACPLE_02161 | Not Available | Positive | 2395162 - 2396724 | 58108.9 |
| phenylalanine--trna ligase, beta subunit | BACPLE_02162 | Not Available | Positive | 2396826 - 2399288 | 90779.7 |
| hypothetical protein | BACPLE_02163 | Not Available | Positive | 2399298 - 2399540 | 9275.41 |
| dna-binding regulatory protein, yebc/pmpr family | BACPLE_02164 | Not Available | Positive | 2399564 - 2400301 | 27740.6 |
| conserved hypothetical protein tigr03905 | BACPLE_02165 | Not Available | Positive | 2400401 - 2400646 | 8815.83 |
| hypothetical protein | BACPLE_02166 | Not Available | Negative | 2400737 - 2402074 | 52315.2 |
| cyclic nucleotide-binding domain protein | BACPLE_02167 | Not Available | Negative | 2402272 - 2402991 | 27470.6 |
| hypothetical protein | BACPLE_02168 | Not Available | Positive | 2403086 - 2405281 | 84895.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

