Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02149 | Not Available | Positive | 2382437 - 2383144 | 26509.9 |
| hypothetical protein | BACPLE_02150 | Not Available | Positive | 2383207 - 2384073 | 32486.7 |
| hypothetical protein | BACPLE_02151 | Not Available | Positive | 2384073 - 2385020 | 37299.4 |
| hypothetical protein | BACPLE_02152 | Not Available | Positive | 2385020 - 2386027 | 38498.2 |
| had hydrolase, family ia, variant 1 | BACPLE_02153 | Not Available | Positive | 2386020 - 2386742 | 27138.5 |
| l-fucose:h+ symporter permease | BACPLE_02154 | Not Available | Positive | 2386735 - 2387961 | 45059.1 |
| hypothetical protein | BACPLE_02155 | Not Available | Negative | 2388071 - 2388571 | 18904.1 |
| pseudouridine synthase, rlua family | BACPLE_02156 | Not Available | Negative | 2388845 - 2390464 | 61501.9 |
| hypothetical protein | BACPLE_02157 | Not Available | Positive | 2390514 - 2390687 | 6886.58 |
| beta-lactamase | BACPLE_02158 | Not Available | Positive | 2390694 - 2391854 | 44618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

