Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02139 | Not Available | Positive | 2372031 - 2372156 | 4744.95 |
| hypothetical protein | BACPLE_02140 | Not Available | Positive | 2372153 - 2372533 | 14182.1 |
| hypothetical protein | BACPLE_02141 | Not Available | Positive | 2372573 - 2373154 | 21545.0 |
| lysr substrate binding domain protein | BACPLE_02142 | Not Available | Positive | 2373167 - 2374063 | 33853.0 |
| hypothetical protein | BACPLE_02143 | Not Available | Negative | 2374086 - 2375282 | 44608.4 |
| spoiid/lytb domain protein | BACPLE_02144 | Not Available | Negative | 2375367 - 2376677 | 49757.8 |
| glycosyltransferase, group 2 family protein | BACPLE_02145 | Not Available | Negative | 2376683 - 2379115 | 92486.4 |
| 23s rrna m2a2503 methyltransferase | BACPLE_02146 | Not Available | Positive | 2379205 - 2380260 | 39819.0 |
| hypothetical protein | BACPLE_02147 | Not Available | Positive | 2380274 - 2381338 | 40921.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | BACPLE_02148 | Not Available | Positive | 2381341 - 2382435 | 40407.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

