Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02129 | Not Available | Positive | 2361606 - 2362466 | 32949.4 |
| hypothetical protein | BACPLE_02130 | Not Available | Positive | 2362472 - 2362798 | 12594.1 |
| rna methyltransferase, trmh family | BACPLE_02131 | Not Available | Negative | 2362793 - 2363551 | 28024.9 |
| outer membrane protein, omp85 family | BACPLE_02132 | Not Available | Positive | 2363656 - 2365965 | 89480.5 |
| hypothetical protein | BACPLE_02133 | Not Available | Positive | 2365982 - 2366218 | 9281.24 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | BACPLE_02134 | Not Available | Positive | 2366323 - 2367966 | 59872.8 |
| hypothetical protein | BACPLE_02135 | Not Available | Negative | 2368025 - 2368273 | 9590.87 |
| putative phage tail component domain protein | BACPLE_02136 | Not Available | Positive | 2368401 - 2369042 | 25187.7 |
| atp-dependent chaperone protein clpb | BACPLE_02137 | Not Available | Negative | 2369156 - 2371744 | 97254.6 |
| hypothetical protein | BACPLE_02138 | Not Available | Positive | 2371897 - 2372034 | 5230.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

