Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02119 | Not Available | Negative | 2353100 - 2353258 | 6325.93 |
| transcriptional regulator, arsr family | BACPLE_02120 | Not Available | Positive | 2353393 - 2353719 | 12364.2 |
| hypothetical protein | BACPLE_02121 | Not Available | Positive | 2353783 - 2354244 | 17202.9 |
| cytochrome c biogenesis protein transmembrane region | BACPLE_02122 | Not Available | Positive | 2354257 - 2354964 | 25721.5 |
| redox-active disulfide protein 2 | BACPLE_02123 | Not Available | Positive | 2354998 - 2355234 | 8656.82 |
| putative permease | BACPLE_02124 | Not Available | Positive | 2355338 - 2356306 | 35488.7 |
| low molecular weight phosphotyrosine protein phosphatase | BACPLE_02125 | Not Available | Positive | 2356370 - 2356780 | 14915.5 |
| isoleucine--trna ligase | BACPLE_02126 | Not Available | Positive | 2356918 - 2360406 | 132136.0 |
| putative rna polymerase-binding protein dksa | BACPLE_02127 | Not Available | Positive | 2360470 - 2360850 | 14347.1 |
| signal peptidase ii | BACPLE_02128 | Not Available | Positive | 2360971 - 2361609 | 24264.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

