Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal efflux pump, czca family | BACPLE_02099 | Not Available | Positive | 2330802 - 2335136 | 161097.0 |
| hypothetical protein | BACPLE_02100 | Not Available | Positive | 2335157 - 2336074 | 33455.9 |
| histidine kinase | BACPLE_02101 | Not Available | Positive | 2336084 - 2337127 | 40506.6 |
| lyttr dna-binding domain protein | BACPLE_02102 | Not Available | Positive | 2337124 - 2337882 | 28706.7 |
| abc transporter, atp-binding protein | BACPLE_02103 | Not Available | Positive | 2338001 - 2339620 | 61077.9 |
| hypothetical protein | BACPLE_02104 | Not Available | Positive | 2339806 - 2340963 | 44326.0 |
| putative cytidine deaminase | BACPLE_02105 | Not Available | Negative | 2340970 - 2341449 | 17744.2 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | BACPLE_02106 | Not Available | Positive | 2341591 - 2342481 | 34581.7 |
| putative rrna large subunit m3psi methyltransferase rlmh | BACPLE_02107 | Not Available | Negative | 2342487 - 2342960 | 18204.2 |
| putative membrane protein | BACPLE_02108 | Not Available | Negative | 2342993 - 2343889 | 32607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

