Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_02079 | Not Available | Positive | 2306544 - 2307821 | 47470.9 |
| metal ion transporter, metal ion (mn2+/fe2+) transporter (nramp) family | BACPLE_02080 | Not Available | Positive | 2307899 - 2309161 | 46144.1 |
| mate efflux family protein | BACPLE_02081 | Not Available | Negative | 2309158 - 2310519 | 49523.5 |
| had hydrolase, family ia, variant 3 | BACPLE_02082 | Not Available | Positive | 2310607 - 2311254 | 24459.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BACPLE_02083 | Not Available | Positive | 2311258 - 2312139 | 31780.8 |
| transporter, major facilitator family protein | BACPLE_02084 | Not Available | Positive | 2312247 - 2313368 | 41774.9 |
| atp-binding cassette protein, chvd family | BACPLE_02085 | Not Available | Positive | 2313388 - 2315076 | 64007.6 |
| type i phosphodiesterase / nucleotide pyrophosphatase | BACPLE_02086 | Not Available | Negative | 2315248 - 2316435 | 45568.7 |
| tonb-dependent receptor plug domain protein | BACPLE_02087 | Not Available | Negative | 2316528 - 2319689 | 116674.0 |
| transporter, major facilitator family protein | BACPLE_02088 | Not Available | Positive | 2320161 - 2321336 | 42626.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

